geochemistrypi package

Subpackages

• geochemistrypi.auth package
  • Submodules
  • geochemistrypi.auth.constants module
  • geochemistrypi.auth.dependencies module
  • geochemistrypi.auth.router module
  • geochemistrypi.auth.schemas module
    • User
      • User.Config
      • User.hashed_password
      • User.id
    • UserBase
      • UserBase.email
      • UserBase.is_active
      • UserBase.upload_count
      • UserBase.username
    • UserCreate
      • UserCreate.password
  • geochemistrypi.auth.service module
  • geochemistrypi.auth.sql_models module
  • geochemistrypi.auth.utils module
    • create_access_token()
    • decode_access_token()
    • get_password_hash()
    • verify_password()
  • Module contents
• geochemistrypi.data_mining package
  • Subpackages
    • geochemistrypi.data_mining.data package
      • Submodules
      • geochemistrypi.data_mining.data.data_readiness module
      • geochemistrypi.data_mining.data.feature_engineering module
      • geochemistrypi.data_mining.data.imputation module
      • geochemistrypi.data_mining.data.inference module
      • geochemistrypi.data_mining.data.preprocessing module
      • geochemistrypi.data_mining.data.statistic module
      • Module contents
    • geochemistrypi.data_mining.model package
      • Subpackages
      • Submodules
      • geochemistrypi.data_mining.model.classification module
      • geochemistrypi.data_mining.model.clustering module
      • geochemistrypi.data_mining.model.decomposition module
      • geochemistrypi.data_mining.model.regression module
      • Module contents
    • geochemistrypi.data_mining.plot package
      • Submodules
      • geochemistrypi.data_mining.plot.geochemistry_plot module
      • geochemistrypi.data_mining.plot.map_plot module
      • geochemistrypi.data_mining.plot.statistic_plot module
      • Module contents
    • geochemistrypi.data_mining.process package
      • Submodules
      • geochemistrypi.data_mining.process.classify module
      • geochemistrypi.data_mining.process.cluster module
      • geochemistrypi.data_mining.process.decompose module
      • geochemistrypi.data_mining.process.regress module
      • Module contents
    • geochemistrypi.data_mining.tests package
      • Subpackages
      • Module contents
    • geochemistrypi.data_mining.utils package
      • Submodules
      • geochemistrypi.data_mining.utils.base module
      • geochemistrypi.data_mining.utils.exceptions module
      • geochemistrypi.data_mining.utils.mlflow_utils module
      • Module contents
  • Submodules
  • geochemistrypi.data_mining.cli_pipeline module
    • cli_pipeline()
  • geochemistrypi.data_mining.constants module
  • geochemistrypi.data_mining.dash_pipeline module
    • dash_pipeline()
  • geochemistrypi.data_mining.router module
  • geochemistrypi.data_mining.schemas module
    • Dataset
      • Dataset.Config
      • Dataset.id
      • Dataset.json_data
      • Dataset.name
      • Dataset.sequence
      • Dataset.user_id
    • Diagram
      • Diagram.Config
      • Diagram.dataset_id
      • Diagram.id
      • Diagram.image
      • Diagram.name
  • geochemistrypi.data_mining.service module
  • geochemistrypi.data_mining.sql_models module
  • Module contents

Submodules

geochemistrypi.cli module

data_mining(data: str = <typer.models.OptionInfo object>, training: str = <typer.models.OptionInfo object>, inference: str = <typer.models.OptionInfo object>, mlflow: bool = <typer.models.OptionInfo object>, web: bool = False) → None

Implement the customized automated machine learning pipeline for geochemistry data mining.

main(version: bool | None = <typer.models.OptionInfo object>) → None

Geochemistry π is an open-sourced highly automated machine learning Python framework for data-driven geochemistry discovery. It has the cores components of continous training, machine learning lifecycle management and model serving.

web_setup() → None

Set up the dependency of the web application.

geochemistrypi.database module

get_db()

Get a database session.

geochemistrypi.start_cli_pipeline module

geochemistrypi.start_dash_pipeline module

custom_openapi()

async read_root() → dict

Module contents